Browse of TCMCG007C43351 protein

CDS

Accession Number	TCMCG007C43351
gbkey	CDS
Protein Id	XP_009125142.1
Location	join(16819027..16819202,16819319..16819584,16819654..16819823,16819906..16820122,16820377..16820723,16821107..16821286,16821363..16821498,16821586..16821734,16821894..16822005,16822113..16822684,16822784..16822907,16822996..16823273,16823358..16823468,16823587..16823649,16823800..16823991,16824108..16824167,16824271..16824339,16824583..16824729,16824813..16824932,16825029..16825145,16825273..16825428,16825496..16825558,16825659..16825729,16825929..16826340,16826449..16826551,16826638..16826747,16826869..16826940,16827037..16827112,16827194..16827301,16827383..16827524,16827615..16827680,16827775..16827991,16828066..16828120,16828203..16828294,16828390..16828453,16828549..16828919)
Gene	LOC103850178
GeneID	103850178
Organism	Brassica rapa

Protein

Length	1927aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009126894.3
Definition	nuclear pore complex protein GP210 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Bacterial Ig-like domain (group 2)
KEGG_TC	1.l.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K14314        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005783        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTTCGTATCTCATCGTGCTTCTTCGTCGTGGTTCTGATTGTGCTTTCGATTCGAGAAAGTTCGTCGCAGTTAGGTACTGGTCCGCACATTACTGATGTCAATATACTGTTGCCTCCGAGGATGAAGAATCCAGTAGAGTATCGCCTTCAAGGAAGCGATGGCTGCTTCAAATGGTCATGGGATCATCATGATATTCTCTCGGTTACGCCTGAGTTTAATTCGAGCAGTCACTGCTCCACCAGCGCGCGTCTAAAATCGATTTCGCCTTATAGCGGAAGGAAGGAGACTGCAGTTTATGCAACCGATATACAGACGGGGATGGTGATTCGCTGCAAGGTGTTTATTGACAACTTCTCACGGATCCAGATTTTTCATAACTCTATCAAGCTTGATCTTGATGGACTTTCCATGCTTAGAGTCCGCGCTTTTGATAATGAAGATAACGAGTTCTCCTCACTGGTGGGTCTACAGTTCATGTGGAAGCTAATGCCTGAAAGTGGCGGAGGAACAACGCATCATCTTGCTCATGTCCCTTTGAAGGAATCTCCGTTGACTGACTGTGGGGGACTTTGTGGCTACTTGGATATCCAGAAAAAGCTTGAGGATAGTGGGGTGTTTGCAGATTTGTTTGTGGTGAAGGGAACCAAAATTGGACATGAGAAGGTTTCAGTTCATCTGTTGGAGGCTCCCCTTGCCCATATAGCCGATGAAATAGTACTAACCGTAGCAGAGGCCATGTCACTTGAACCTCGTTCACCAGTCTATGTCCTAATGGGTGCTTCTTTTGGTTACACTTTAAAGGTCATGCGTGGGAATGTTCCTCAAGCCGTGCATCTACCATCATCACATCACAGATGGTCTGCGTTGAACTCTTCGGTTGTTCAAGTAGATTCTTTGAATGGTCTGACTAAAGCATTAAGCTTGGGGGTAACAACAGTTGTTGTTGAAGATACCCGGGTTGCTGGACACATTCAAGGATCATCTATTAATGTTGTCACTCCAGATGCTTTTATCTTGTACATATCTCCTTGGTCAACGTCAGGGGATCCTACTACAGAATCGAAACCTTTTCCGTCATCTATGCATTGGTATGTGGTCTCTGGTCGTCAATATCTGATTCAGATGAAGATTTTCTCTGGAAGACCTGATGCACATGAAATCTATATAACTGAGACGGATGATATCAAACTGTATGGAGAAGAGACAGATTATTGGAAAATCGTTTCAGTGCCAGATGATCTTTCCTCTGAATATGGTTGGCGAAATTCTAGAATTTTGAAAGCAATCTCACCAGGATTAGGAGAGCTGACAGCTGCATTGACTTACTTCAATGGACATCAGAATTCAAAAGAGGTTCTCAAGGTTGTCCAAGACATTGTGGTTTGTCAAAAGGTGCAGTTCACATTGAACAGTGAAGATGACGCACCTAAGATTCTACTCCCTTGGACCCCTGCTGTATATCAAGAGATGGAGCTAATTGTGTCAGGAGGTTGTGCGAAAGCATCGAGTGACTACAAGTGGTTTACTTCAGATATGAGCATTTTGTCTGTGTCAGCTTATGGAATTATCCAGGCAAAGAGGCCTGGAATAGCCACTGTAAAGGTGGTGTCGACTTTCGATTCACAAAATTTTGATGAGGTTATTGTTGAAGTTTCCATTCCATCCTCTATGGTTATGTTGCAATACTTCCCAGTAGAGACAGTGGTTGGATCACACCTGCAAGCAGCTGTCACAATGAAGGCTTTAAATGGTGCCTCGTTCTCTAGATGTGATGCTTTCAATTCATTGATAAAGTGGAAGACAGAGAGTGACTCTTTTGTTATAGTTAATGCAACAGCCGAGATGATGATGTTGGAAGAATTAAGAAGCACGGAGTCCAGTCCCCCTTGTTCTCGGGCTTATATATATACTTCATCTCCTGGCCGCACAGTGCTAAAAGCAACTCTAGCAAAAGAGTTCCATTATTTTGATAAGTCGTTAAGCGAATCAATTGATTTGAAAGCAACTTTAAGTATCGGGGCCTATCTGCCACTTACTATCCGACAAGATAGTGATGGGAATCATCATGGTGGATATTGGTTTGATAAGACACAAGAAGAAACTGATATTGGTGTTAGTAACCTCTATCTTGTACCTGGGACATATGTTGATGTGATGCTTCTGGGGGGACCTGAAAGGTGGGATGACAATGTTGAGTTCACCGAGACTGTGACTAAAGTGAATGAAGATGAGGAGGATCTTACAAATGGAGATAACATCCATCACAACTTTGACCACCATGCTAACATGTTTAGAGTTTCGTGCCAGACGCTTGGTTCTTATAAACTGATATTCCAGCGTGGAAATCTGGTCGGGGTGGACCATCCTTTACCTGCAGTGGCAGAAGCTTTCTTATCTGTTCAATGCAGCTTACCATCCTTTGTTGTGCTCATTGTTGATGAACCTGTTAACAAGCTTAGTGTGATTAGAGCTGCTAGTCAAGCTGAGAGGGCACCAGGACGACTTCGTGTAACTCCTGTGACTGTAGCAAATGGGCAAATAATTCGAGTGGCTGCTGTTGGTATTAGCGACTCTGGAGAAGCTTTTTCAAACTCATCAACTCTTTCACTCAGGTGGGAACTGAGTAGTTGCGACAATTTGGCTTCTTGGGACGATGATTATAATTCAAAAATGACAAAGACTAGCTGGGAGAGATTTCTAGCTCTTCGTAATGAATCTGGATTGTGCACTGTACGGGCTACAGTTTCTGGTATTGATCATTCTGGAAAACCCCAATACTCATCTCTGCTTCCAGAAGTGTCCGAAAGTACTCTCACAGATGCTGTACGCTTACAGTTGGTTTCTACACTAAGAGTCACGCCAGAGTTCAACCTGGTTTTTCTCAATCCTAATGCCAAGGTTAATTTGTCAATGACTGGAGGAAGCTGTTTGTGGGAAGCAGTTGTGAATGATTCTCGTGTAGCAGAAGTGATTAGACCCCCATCTGGCCTGCAATGCTCGCAAATGACCCTATCTCCAAAAGGGTTAGGGACTACACTTGTGACGGTATATGATATTGGGGTCTCTCCTCCACTTTCAGCTCTTGCGGTGATTAAAGTTGCAGACATAGACTGGATAAAAATTGCATCTGGGGATGAGATAAGTATAATGGAAGGAAGTACACACTCCTTTGATCTACTGACTGGCATTGACGATGGGACGACCTTTGATTCTTCGCAGTACCCGCTAATGGATATTATGGTGCATATTGAGGATGATCTGGCGGAGCATGTTTCTGTCGATGATAATCCACTTTCTGTTGGTGAACACGTGGCAACTTCTTCATTCAAAGTAGCTGCTAGACGCCTGGGAATCACAACACTATATGTTAGCGCGAGACAACAATCAGGAGATAAAGTGGTGAGCCAAACTATTAAAGTGGAAGTTTATGCCCCACCAAGACTTCACCCACAAGGAATATTTCTTGTTCCTGGTGCTTCTTACGTGCTCACTGTTGAAGGAGGCCCAACCATGAATGTTTCTGTTGACTACACCACTGTAGATAACGAAGTTGCAAAGATCGAGAAATCAGGACGCCTCTATGCAACATCACCTGGCAACACGACAATCTATGCAACAATATATGGGAGTGAAGGTACTGTAGTTTGTGAAGCAGTTGGAAATGCCGAAGTTGGACTTCCTGCTGCTGCAACGCTGATAGCTCAAAGTGATACTGTGGCTGTTGGCCGTGAAATGCCTATATTTCCATCATTTTCTCAGGGAGATCTTTTGTCTTTCTATGAGCTCTGCAGAGCATACCGATGGACTATCGAAGATGAGGAGGTGTTGAGTTTCCATGTACCGTCTATTGACGTGGAAGAGAATGCTGGCTTTGTCAATGTCGTCCAAGGAAGATCTGCTGGGAAAACCAGAGTCACCATTGCGTTCTCATGTGATTTCGTGTCTCCTGGCTTGTACTCCGAATCTAGAACATATGAAGCATCAATAGTTTTATCTGTTGTGCCTGATCTCCCTCTTTCTCTTGGGATTCCTATGACCTGGGTTCTTCCGCCATTTTATACGTCATCTAGTCTATTGCCATCATCTCCTGAGACACCAAAGCACAAGGATGGTCAAAGTCACAGAGGCAATGTAGTCTATTCCCTATTGAAAGACTGTAGTTCTCGGGCTGACGTCGAAAGAGATACTATATCAATTAACGGCGGAAACATCAAAACTACAGAAATCAACAATGTTGCATGTATTCAAGCCAAAGACCGCACAAGTGGAAGGATCGAGATTGCTGCTTGTGTGAGGGTTGCAGAGGTTGCTCAAATAAGAATGAATAGTGAAGTGATCCCTTTCCACGTGGTGGATCTTGCTGTTGGTGGTGAACTTGAACTTCCAATAAATTACTATGACACTTTAGGAATCGGTTTTCTAGAAGCACATGGTGTTACTACATACAACGTTGAAACCAATCATCGTGATGTTGTGTCTATTAAGACTGTCAATGACCAAACAAGTGTCTACATTAAGGGAATAAAACATGGTAAAGCTTTAATTCGGGTCTCCATTGGCGGTAATCTGAGGAAAGCAGACTACGTTCTGGTTTCAGTTGGGGCACATATCCATCCTCAAAAACCTGTCATTCACACTGGAAATATGCTGAATTTCAGCGTTACAGGGGCTGATCATCAAGTCTCTGGTCAATGGGTTTCATCGAACAGGAGTGTCCTATCCGTCAATGCAGTATCCGGCCAAGCTAAAGCAATCGGCCAAGGGTCAGCTCACGTTACATTTGAAGGTCATCGTTTGAAGCTGCAAACAAAAGTCACAGTGCTACTTGGAAACACCATATATGTTGACTCTCCTAGAGAAACACTAACAAATGTCCACGTCCCTGCAGAAGGATATAGCTTTCCTGTAAAATTCAGGGAGAACACGTTTGTGAAAGGAAACAGGAACACATTCAACTGCCAAGTAGACCCTCCATTTATAGGATATGCGAAGCCATGGGTGGATCTTGACACTGGAGACACTCGTTGTCTTTTCTTCCCATACTCACCGGAGCATCTGGTTCACTCAATGTCTAGATCAAAAGACACGAAATCGCATGTGTCCTTCTCCATTAATGCTTCAGTCAAAGAAGGTCGACAGGTGTCGGGATCTGCGTCTGCACTTCTTATTGGAGGGTTTTCTGTAGCATGGCCAAACAAGTTGAATATAAACCCGGATTCAAACAAGACTACAATTTCAGTACAAGGGAACACCGATGTTCAAATTCACTGGCAAAGCAAAGGAAGGTTATCGATCAGCTTGATCAAGAGAGAAGATTATGGTATCGCAGGGCGTGCACTATACGAGGTGAATGTGCTTAATAGATCAGAGCAATTCACAGATATAATATTCATCACTCTCCCTGCTACTGGCCAAAGTGTAGAAATCGATTTCTCTTATGATACGGGTGAATCCTTAGTAGCGCCATCTGTGAGAAAAGATGGATACCTGTTTACGATACTATGGGGTGTTTTAGTGGTGATTGTATCGGTGGTCATCTTGATGAAAGTGATAGATAGACCAATTGGTCCAGCTGGGGCCACTAGAGTTGCAACAAACGGTGTTGCAGCAACAGCAGGAGCACCGGGAACACCAGAAAGAAGAAGTGGTGCAGTGATATACCATGAGGAATCTCCAAGAACACCATCACCATTTATGGAGTATGTCAAGAGGACTGTGGATGAGACTCCTTACTACAGAAGAGAAGGGAGGAGGAGGTTTAATCCTCAAAACACTATGTAG

Protein:   MVRISSCFFVVVLIVLSIRESSSQLGTGPHITDVNILLPPRMKNPVEYRLQGSDGCFKWSWDHHDILSVTPEFNSSSHCSTSARLKSISPYSGRKETAVYATDIQTGMVIRCKVFIDNFSRIQIFHNSIKLDLDGLSMLRVRAFDNEDNEFSSLVGLQFMWKLMPESGGGTTHHLAHVPLKESPLTDCGGLCGYLDIQKKLEDSGVFADLFVVKGTKIGHEKVSVHLLEAPLAHIADEIVLTVAEAMSLEPRSPVYVLMGASFGYTLKVMRGNVPQAVHLPSSHHRWSALNSSVVQVDSLNGLTKALSLGVTTVVVEDTRVAGHIQGSSINVVTPDAFILYISPWSTSGDPTTESKPFPSSMHWYVVSGRQYLIQMKIFSGRPDAHEIYITETDDIKLYGEETDYWKIVSVPDDLSSEYGWRNSRILKAISPGLGELTAALTYFNGHQNSKEVLKVVQDIVVCQKVQFTLNSEDDAPKILLPWTPAVYQEMELIVSGGCAKASSDYKWFTSDMSILSVSAYGIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQYFPVETVVGSHLQAAVTMKALNGASFSRCDAFNSLIKWKTESDSFVIVNATAEMMMLEELRSTESSPPCSRAYIYTSSPGRTVLKATLAKEFHYFDKSLSESIDLKATLSIGAYLPLTIRQDSDGNHHGGYWFDKTQEETDIGVSNLYLVPGTYVDVMLLGGPERWDDNVEFTETVTKVNEDEEDLTNGDNIHHNFDHHANMFRVSCQTLGSYKLIFQRGNLVGVDHPLPAVAEAFLSVQCSLPSFVVLIVDEPVNKLSVIRAASQAERAPGRLRVTPVTVANGQIIRVAAVGISDSGEAFSNSSTLSLRWELSSCDNLASWDDDYNSKMTKTSWERFLALRNESGLCTVRATVSGIDHSGKPQYSSLLPEVSESTLTDAVRLQLVSTLRVTPEFNLVFLNPNAKVNLSMTGGSCLWEAVVNDSRVAEVIRPPSGLQCSQMTLSPKGLGTTLVTVYDIGVSPPLSALAVIKVADIDWIKIASGDEISIMEGSTHSFDLLTGIDDGTTFDSSQYPLMDIMVHIEDDLAEHVSVDDNPLSVGEHVATSSFKVAARRLGITTLYVSARQQSGDKVVSQTIKVEVYAPPRLHPQGIFLVPGASYVLTVEGGPTMNVSVDYTTVDNEVAKIEKSGRLYATSPGNTTIYATIYGSEGTVVCEAVGNAEVGLPAAATLIAQSDTVAVGREMPIFPSFSQGDLLSFYELCRAYRWTIEDEEVLSFHVPSIDVEENAGFVNVVQGRSAGKTRVTIAFSCDFVSPGLYSESRTYEASIVLSVVPDLPLSLGIPMTWVLPPFYTSSSLLPSSPETPKHKDGQSHRGNVVYSLLKDCSSRADVERDTISINGGNIKTTEINNVACIQAKDRTSGRIEIAACVRVAEVAQIRMNSEVIPFHVVDLAVGGELELPINYYDTLGIGFLEAHGVTTYNVETNHRDVVSIKTVNDQTSVYIKGIKHGKALIRVSIGGNLRKADYVLVSVGAHIHPQKPVIHTGNMLNFSVTGADHQVSGQWVSSNRSVLSVNAVSGQAKAIGQGSAHVTFEGHRLKLQTKVTVLLGNTIYVDSPRETLTNVHVPAEGYSFPVKFRENTFVKGNRNTFNCQVDPPFIGYAKPWVDLDTGDTRCLFFPYSPEHLVHSMSRSKDTKSHVSFSINASVKEGRQVSGSASALLIGGFSVAWPNKLNINPDSNKTTISVQGNTDVQIHWQSKGRLSISLIKREDYGIAGRALYEVNVLNRSEQFTDIIFITLPATGQSVEIDFSYDTGESLVAPSVRKDGYLFTILWGVLVVIVSVVILMKVIDRPIGPAGATRVATNGVAATAGAPGTPERRSGAVIYHEESPRTPSPFMEYVKRTVDETPYYRREGRRRFNPQNTM